Congresso Nazionale SISC Open access

OC16 | GUT MICROBIOTA FUNCTIONAL REMODELING IN PEDIATRIC MIGRAINE: A MULTI-OMIC INSIGHT INTO NEUROACTIVE AND IMMUNOMETABOLIC PATHWAYS

L. Papetti1, S. Levi Mortera2|3, M. Di Michele2|3, F. Del Chierico4, G. Monte1, F. Ursitti1, G. Sforza1, C. Granata5, L. Putignani4, M. Valeriani1|5|6 | 1Developmental Neurology Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy; 2Chromatography and Mass Spectrometry Core Facility, Research Laboratory Platform, Bambino Gesù Children's Hospital, IRCCS Rome, Italy; 3Management and Diagnostic Innovation & Clinical Pathway Research Area, Microbiome Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy; 4Unit of Microbiology and Diagnostic Immunology, Unit of Microbiomics and Research Area of Immunology, Rheumatology and Infectious Diseases, Unit of Microbiome, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy; 5Systems Medicine Department, Tor Vergata University, Rome, Italy; 6Center for Sensory‑Motor Interaction, Aalborg University, Denmark

Authors

Published
3 November 2026
Section
Congresso Nazionale SISC

Abstract

Background. Pediatric migraine is increasingly linked to alterations of the microbiota–gut–brain axis, but the functional activity of the gut microbiota remains poorly characterized. We integrated fecal metaproteomics and untargeted metabolomics to investigate gut microbiota-associated functional and metabolic signatures in children with migraine.
Methods. Stool samples from 50 migraine patients and 24 healthy controls were analyzed by LC–MS/MS-based metaproteomics, while metabolomics was performed on 83 migraine patients and 41 controls. Microbial protein groups were functionally annotated using COG and KEGG-based approaches, and fecal metabolites were annotated from untargeted metabolomic profiles.
Results. Metaproteomics revealed selective remodeling of microbial pathways related to nitrogen metabolism, arginine/citrulline and glutamate–glutamine turnover, aromatic amino acid metabolism, and short-chain fatty acid-associated functions. These changes converged with fecal metabolomic alterations involving arginine-related metabolites, glutamate/GABA-associated compounds, tryptophan- and tyrosine/phenylalanine-derived metabolites, purine intermediates, and lipid-related molecules. The nitrogen and arginine/citrulline signature suggested a potential link with nitric oxide-related pathways, whereas glutamate/GABA and aromatic amino acid alterations pointed to remodeling of neuroactive microbial functions. Changes in lipid/acyl-CoA, butanoate/propanoate, and purine-related pathways suggested an altered intestinal immunometabolic environment potentially relevant to barrier integrity, mucosal immune regulation, purinergic signaling, and microbiota–gut–brain communication.
Conclusions. Integrated metaproteomic and metabolomic profiling identified selective remodeling of gut microbial functions and fecal metabolic outputs in pediatric migraine, supporting a functional microbiota signature potentially linked to nitric oxide-related metabolism, neuroactive amino acid pathways, purine signaling, and intestinal immunometabolic homeostasis.

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